Profile

The laboratory uses an integrated evolutionary bioinformatics platform to understand disease biology with particular focus on better understanding of origin, adaptation, transmission and evolution of pathogenicity and antibiotic-resistance among microbes in a wide variety of environments

Current Focus Areas

  • Evolutionary of antibiotic resistance in Gram Positive priority pathogens, Computer aided drug discovery of novel targets and synergies to combat AMR

Selected Publications

  • Shijulal Nelson-Sathi, Filipa L Sousa, Mayo Roettger, Nabor Lozada-Chávez, Thorsten Thiergart, Arnold Janssen, David Bryant, Giddy Landan, Peter Schönheit, Bettina Siebers, James O McInerney, William F Martin. (2015). Origins of major archaeal clades correspond to gene acquisitions from bacteria, 517, 7532, 77–80

  • Ku C, Nelson-Sathi S, Roettger M, Sousa FL, Lockhart PJ, Bryant D, Hazkani-Covo E, McInerney JO, Landan G, Martin WF (2015) Endosymbiotic origin and differential loss of eukaryotic genes. Nature 524:427-432.

  • Jiffy John, Sinumol George, Sai Ravi Chandra Nori, Shijulal Nelson-Sathi (2019), Phylogenomic Analysis Reveals the Evolutionary Route of Resistant Genes in Staphylococcus aureus, Genome Biol. Evol. 11(10):2917–2926

  • Roshny Prasad, Anil Kadam, Vinitha Vinod Padippurackal, Aparna Pulikuttymadom Balasubramanian, Naveen Kumar Chandrakumaran, Kartik Suresh Rangari, Pawan Dnyaneshwar Khangar, Harikrishnan Ajith, Kathiresan Natarajan, Rajesh Chandramohanadas, Shijulal Nelson-Sathi (2024), Discovery of small molecule entry inhibitors targeting the linoleic acid binding pocket of SARS-CoV-2 spike protein. Journal of Biomolecular Structure and Dynamics, 1–15.

Skills & Proficiency

Bioinformatics Antibiotic resistance Evolution Genomics Metagenomics Phylogenetics Lateral Gene Transfer Molecular Docking Molecular Dynamic Simulation Structural Bioinformatics